Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  208 bits (529), Expect = 1e-58
 Identities = 110/275 (40%), Positives = 164/275 (59%), Gaps = 20/275 (7%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFA------------------FTFEN 53
           ++ +   WL+ F LIP  ++   S L++    +  +                   F+ +N
Sbjct: 13  VIIIPYAWLLFFFLIPFFIVFRIS-LSQTAVAMPPYMPVFDLAGGLSGIMEKLGEFSLDN 71

Query: 54  YTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWT 112
           Y  L  D LY    + S  +A ++T + L+IGYP AY +AK P   RP +L ++I+PFWT
Sbjct: 72  YVWLTEDVLYFNAYVSSVVIAAISTFLTLLIGYPIAYGMAKAPRSLRPTLLMIVILPFWT 131

Query: 113 NSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYS 172
           + LIR Y    +L  +G+LNQ L ++GLID PL I+ T  A+ IG+VY  LPFM+LP+YS
Sbjct: 132 SFLIRVYAWIAILKPEGLLNQVLSAVGLIDQPLIILNTNLAIYIGIVYSYLPFMVLPIYS 191

Query: 173 AIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGA 232
           A+EK+D +  EAA+DLG        RV  PL++PG++ GCLLV +PA+G F I DLLGG+
Sbjct: 192 ALEKMDHSLTEAAQDLGCTPAAAFWRVTFPLSLPGVVAGCLLVFIPAVGEFVIPDLLGGS 251

Query: 233 KNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAI 267
           + L+IG  + S+  + RDWP  +A +I L + + I
Sbjct: 252 ETLMIGKTLWSEFNSNRDWPVSSAVAIILLMILVI 286