Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., putrescine transport system permease protein PotH from Phaeobacter inhibens DSM 17395

 Score =  222 bits (565), Expect = 9e-63
 Identities = 108/225 (48%), Positives = 152/225 (67%), Gaps = 1/225 (0%)

Query: 51  FENYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVP 109
           FEN+T L  D LY K  L S  +A+V+T++ L++GYP AY +A+ P +WRP ++ L+I+P
Sbjct: 59  FENFTWLTEDDLYWKAYLSSLRIAVVSTVLTLLVGYPMAYGMARAPSEWRPTLMMLVILP 118

Query: 110 FWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILP 169
           FWT+ LIR Y    +L  +G+LNQ L+  GLID PL I+ T TAV IG+VY  LPFMILP
Sbjct: 119 FWTSFLIRVYAWMGILSNEGLLNQFLIWAGLIDTPLTILNTNTAVYIGIVYTYLPFMILP 178

Query: 170 LYSAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLL 229
           +YSA+E+LDG+ IEAA DLG ++ +    V +PL+  GII GC LV +P LG F I  LL
Sbjct: 179 IYSALERLDGSLIEAAEDLGCSRMEAFWLVTIPLSRAGIIAGCFLVFIPTLGEFVIPSLL 238

Query: 230 GGAKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274
           GG+  L+IG V+  +  + RDWP  +A ++ L L + + +  + R
Sbjct: 239 GGSDTLMIGKVLWEEFFSNRDWPVASAVAVVLLLILIVPIVLFQR 283