Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., putrescine ABC transporter permease from Klebsiella michiganensis M5al

 Score =  201 bits (512), Expect = 1e-56
 Identities = 106/276 (38%), Positives = 166/276 (60%), Gaps = 13/276 (4%)

Query: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEA-----NLIKFA-------FTFENYTRLLD 59
           ++ L   WL+L  L+P L++   S      A     +L+++A           N+ +L D
Sbjct: 32  VIALPYVWLILLFLLPFLIVFKISLAEMARAIPPYTDLLEWADGQLTLTLNLGNFLQLTD 91

Query: 60  -PLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRT 118
            PLY +  L S  +A ++T  CL++GYP A+ VA      R  +L L+I+P WT+ LIR 
Sbjct: 92  DPLYFEAYLQSLQVAAISTFCCLLLGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRV 151

Query: 119 YGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLD 178
           Y    +L + G+LN  L+ LG+ID PL I+ T  AV IG+VY  LPFM+LP+Y+A+ ++D
Sbjct: 152 YAWMGLLKSNGVLNNFLLWLGIIDQPLEILHTNLAVYIGIVYAYLPFMVLPIYTALTRID 211

Query: 179 GTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIG 238
            + +EA+ DLGA   +T  +VI+PLT  GII G +LV +PA+G F I +LLGG  +++IG
Sbjct: 212 YSLVEASLDLGARPLKTFFQVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIG 271

Query: 239 NVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274
            V+  +  N RDWP  +A +I + L + + +  +++
Sbjct: 272 RVLWQEFFNNRDWPVASAVAIVMLLLLIVPIMWFHK 307