Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., polyamine ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  279 bits (714), Expect = 5e-80
 Identities = 133/276 (48%), Positives = 191/276 (69%)

Query: 2   MSKKLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPL 61
           M+K+   +NA + ++  WL LF L+PN  ++  + L R E + ++  FT  NY RL DP 
Sbjct: 1   MAKRNAFRNASIAVVALWLGLFALLPNAGLLLVTVLQRGEQDFVEPVFTLANYARLFDPT 60

Query: 62  YGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGL 121
           + +++  S  +A  +T +CL++GYPFAY +A      RP+ L L+I+PFWTNSLIRTY L
Sbjct: 61  FLRILWDSIALAATSTFVCLLVGYPFAYRIAMARRSVRPWFLLLVIIPFWTNSLIRTYAL 120

Query: 122 KIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTY 181
            I+L +QG+++  L+ LG IDAP+ +M+++ AV +GL Y LLPFMILPLY +I+KLD   
Sbjct: 121 IILLKSQGLVSDVLLFLGFIDAPISLMYSDLAVFVGLTYTLLPFMILPLYVSIDKLDRKL 180

Query: 182 IEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVI 241
           ++AA+DLGA   +    V LPLTMPGI+ G +LV LP+L  FYI ++LGGAK +LIGN I
Sbjct: 181 LDAAKDLGAGSLRAFWHVTLPLTMPGIVAGSMLVFLPSLACFYIPEILGGAKAMLIGNFI 240

Query: 242 KSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGK 277
           K+Q L ARDWP GAA S  LTL + +++ A++ A +
Sbjct: 241 KNQFLVARDWPLGAAASTILTLLLVLLIVAWWLASR 276