Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  201 bits (511), Expect = 2e-56
 Identities = 106/279 (37%), Positives = 162/279 (58%), Gaps = 15/279 (5%)

Query: 19  WLVLFVLIPNLMIIGTSF------------LTRDEANLIKFAFTFENYTRLL-DPLYGKV 65
           WL +F  +P ++++  SF            L   +  ++ FA    +Y  LL D LY   
Sbjct: 46  WLTVFFALPFVLVLKISFADLRLGIPPYTDLVTVKDGMVHFAMQLSHYAFLLQDDLYVAT 105

Query: 66  MLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVL 125
            + S  MA V+T  CL+IGYP AY +A+     R  ++  +++PFWT+ LIR Y    +L
Sbjct: 106 YISSLKMAAVSTFFCLLIGYPIAYYIARSEPTKRNLLMMGVMLPFWTSFLIRVYAWIGIL 165

Query: 126 GTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAA 185
              G+LN  LM++G+I +PLR+  T+  V IG+VY  LPFM++PLY+ + K+D T +EAA
Sbjct: 166 KDDGLLNHTLMAIGMIHSPLRLYHTDIGVYIGMVYSYLPFMVMPLYAHLVKMDLTLLEAA 225

Query: 186 RDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQV 245
            DLG   +    R+ LPL+  GII G LLV +PA+G + I +LLGGA  L+IG V+  + 
Sbjct: 226 YDLGCKPWTAFTRITLPLSKNGIIAGSLLVFIPAVGEYVIPELLGGADTLMIGRVMWDEF 285

Query: 246 LNARDWPFGAATSIALTLAMAI--MLYAYYRAGKLLNKK 282
            N  DWP  +A ++A+ L + +   ++ YY+  +L   K
Sbjct: 286 FNDMDWPMASAVTVAMVLLLLVPMAVFQYYQVKELEGAK 324