Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  208 bits (529), Expect = 1e-58
 Identities = 112/292 (38%), Positives = 173/292 (59%), Gaps = 14/292 (4%)

Query: 5   KLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSF------------LTRDEANLIKFAFTFE 52
           KL+ + A+V     WL+LF L+P L+++  SF            LT      I       
Sbjct: 17  KLSGRTAVVAGPFIWLLLFFLVPFLLVVKISFADLQLGIPPYTELTNFADGAIHITLDLS 76

Query: 53  NYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFW 111
           +Y  LL D LY    ++S  +A ++TL+CL+IGYP AY +A+     R  ++  +++PFW
Sbjct: 77  HYAFLLTDSLYFATYVNSVVVAAISTLLCLLIGYPMAYYIARSNPGSRNLLMMAVMLPFW 136

Query: 112 TNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLY 171
           T+ LIR Y    +L   G+LN  LMS+GLI +P+ +  T TAV IG+VY  LPF+++PLY
Sbjct: 137 TSFLIRVYAWIGILKNNGLLNNFLMSIGLIHSPIELYHTNTAVYIGMVYSYLPFLVMPLY 196

Query: 172 SAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGG 231
           + + K+D T +EAA DLGA  ++   ++ LPL+  GII GCLLV +PA+G + I +LLGG
Sbjct: 197 AHLVKMDMTLLEAAYDLGAKPWKAFWQITLPLSKNGIIAGCLLVFIPAVGEYVIPELLGG 256

Query: 232 AKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAI-MLYAYYRAGKLLNKK 282
           A  L+IG V+ ++  +  DWP  +A + A+ L + + M +  Y   K + ++
Sbjct: 257 ANTLMIGRVMWNEFFDNADWPMASAVTCAMVLLLLVPMAFFQYAQAKAMEER 308