Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (389), Expect = 2e-42
 Identities = 79/240 (32%), Positives = 137/240 (57%), Gaps = 1/240 (0%)

Query: 12  LVYLFLYLPIIVLIANSFNENKFGI-KWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70
           L+ LFL LP++V+I  SFN   F +    GF+ +WYH    +   M+A  +SI VA  + 
Sbjct: 18  LILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLQWYHDFFASAEWMRALKNSIIVAPAAT 77

Query: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTL 130
             A + G+L A+ L R  F GK +V  ++   M+ P +++ ++    F  +G    FF+L
Sbjct: 78  LLAMVFGTLAAIGLTRGDFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFFSL 137

Query: 131 LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLL 190
           ++ H    +PFV++TV   L GF+  ++ AA  LGA      +++ LPL  P V +G L 
Sbjct: 138 IVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISGALF 197

Query: 191 SFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLL 250
           +F  S D+V+++ F+ GP    LP +++S ++  +SP + A AT+++  S++L++  + L
Sbjct: 198 AFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVILLLTLEWL 257