Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  142 bits (359), Expect = 5e-39
 Identities = 76/249 (30%), Positives = 140/249 (56%), Gaps = 2/249 (0%)

Query: 9   FMSLVYLFLYLPIIVLIANSFN-ENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAV 67
           F +LV +F+  P++V+   +F  EN   +    F+ +W+ A+      + A ++S+ +A 
Sbjct: 11  FHALVVVFMLAPLVVVCLVAFTPENTLSLPTTEFSLRWFRAVFERADFVDAFYNSLVLAF 70

Query: 68  FSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGF 127
            +A+ ATLI    A+A+ R  F G+   +G+    ++ P +V+ ++LL LF +MG    F
Sbjct: 71  CAASLATLIAVPAALAITRLAFPGRDFFNGLFLSPIIIPHLVLGVALLRLFALMGVNGSF 130

Query: 128 FTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAG 187
             L+ AH+    P+V+  V     G D    +AA+ LGAG + + ++I LP+  P VA G
Sbjct: 131 AWLIFAHVLVITPYVLRLVLASAIGLDRSAEQAAQSLGAGRFTLFRQITLPMILPGVAGG 190

Query: 188 WLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVML-VVSLVLVVA 246
           WLL+F  S D+V +S FVT P  + LP+++Y      I P + A++ +++ + +L +++ 
Sbjct: 191 WLLAFINSFDEVTLSIFVTSPATQTLPVRMYVYATESIDPMMAAVSALVIGLTALTMILL 250

Query: 247 SQLLAREKV 255
            ++   ++V
Sbjct: 251 DRVYGLDRV 259