Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  147 bits (372), Expect = 2e-40
 Identities = 75/241 (31%), Positives = 140/241 (58%), Gaps = 1/241 (0%)

Query: 11  SLVYLFLYLPIIVLIANSFNENKFGI-KWGGFTTKWYHALMNNDSLMQAAWHSINVAVFS 69
           +LV LFL +P++V++  SFN   F +    GF+ +WY AL ++   M++  +S+ +A  +
Sbjct: 22  ALVLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNSMLIAPAA 81

Query: 70  ATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFT 129
              A ++G+L AV L R +F+GK ++  +L   M+ P +++ ++    F  +G    + +
Sbjct: 82  TFLAVVLGTLAAVGLTRAEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLGMGNSYLS 141

Query: 130 LLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWL 189
           L++ H    +PFV++TV   L GF+  ++ AA  LGA       ++ LPL  P V +G L
Sbjct: 142 LILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPLIAPGVISGAL 201

Query: 190 LSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQL 249
            +F  S D+V+++ F+ GP    LP +++S ++  +SP + A AT+++  S+ L++  + 
Sbjct: 202 FAFATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAATLLIGFSIALLLTLEW 261

Query: 250 L 250
           L
Sbjct: 262 L 262