Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (367), Expect = 7e-40
 Identities = 85/265 (32%), Positives = 150/265 (56%), Gaps = 19/265 (7%)

Query: 8   SFMSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAV 67
           +F+S VYLFLY PI +++  SFN  +   ++ GF+  WY   + N  L+ A  +S+ +A 
Sbjct: 3   AFISSVYLFLYAPIALVVLFSFNAGRNASEFTGFSLAWYGKALGNTFLVSALQNSLIIAF 62

Query: 68  FSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAI-SLLALFLVMG---- 122
            SAT A + G++ A+ + R   + + +   +    ++ P +V+ I +L+AL  V      
Sbjct: 63  TSATLAAVFGTMAALGMERLGSRMRALFDALFAAAIVVPGVVIGIATLVALVAVFSFVNP 122

Query: 123 -------------AKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEW 169
                          LG+ +++ AH  F +  V + V  R+      ++EA+ DL A   
Sbjct: 123 TIAALWPGEQPPQLGLGYGSIIAAHGLFSMALVTMIVKARIASLGRDIVEASGDLYATPL 182

Query: 170 VILKKIILPLAKPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEV 229
              + I+LP   P++ AG+LL+FT S DD II+ FV G +   LP+ +++ ++ G++PE+
Sbjct: 183 TTFRLIVLPQILPSILAGFLLAFTFSFDDFIIAFFVAG-SKTTLPIYVFASIRRGVTPEI 241

Query: 230 NALATVMLVVSLVLVVASQLLAREK 254
           NA+AT++LV SL+L++ +++L REK
Sbjct: 242 NAIATLVLVASLLLILTARVLMREK 266