Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  238 bits (607), Expect = 1e-67
 Identities = 122/255 (47%), Positives = 181/255 (70%), Gaps = 4/255 (1%)

Query: 6   RFSFMSLV--YLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSI 63
           RF+  S+V  + FLYLPI++L+  SFNE+K    W GF+TKWY  L +N  L+ AAW +I
Sbjct: 6   RFNIASVVLGFGFLYLPIVLLVIFSFNESKLVTVWAGFSTKWYTQLWHNQGLLDAAWVTI 65

Query: 64  NVAVFSATAATLIGSLTAVALFRY-QFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMG 122
            VA+ SAT AT++G+L A+AL RY +F+G+ + SGM++  ++ P+++  +SLL LF+ +G
Sbjct: 66  RVALLSATCATVLGTLAALALVRYTRFRGRVLFSGMVYAPLVMPEVITGLSLLLLFVAIG 125

Query: 123 AKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKP 182
              GF+T+ +AHITF + FV V V +RL  FD  + EAA DLGA        I LP+  P
Sbjct: 126 FDRGFWTITLAHITFTMCFVAVVVQSRLLSFDQSIEEAALDLGATPVRTFFAITLPVIAP 185

Query: 183 AVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVML-VVSL 241
           AV +GW+L+FTLSLDD++ISSF TGP    LP+KIYS V++G++PE+NA+ T+++ +V+L
Sbjct: 186 AVFSGWILAFTLSLDDLVISSFTTGPGATTLPMKIYSQVRLGVTPEINAICTILIGIVAL 245

Query: 242 VLVVASQLLAREKVK 256
            ++VAS +  R +V+
Sbjct: 246 GVIVASIVTKRREVQ 260