Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., spermidine/putrescine ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  132 bits (331), Expect = 9e-36
 Identities = 74/244 (30%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 12  LVYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSA 70
           L  ++L LP+ ++ A SF +  F       +T  WY  ++N+   ++A+ +SI +A+ + 
Sbjct: 19  LFAVYLLLPLALMTAMSFKDASFVAFPITDWTLNWYAQVLNDKQFIEASLYSIGIALATT 78

Query: 71  TAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTL 130
            AAT+IG   A+ +      GK ++  +  +  + P ++ AIS+      +    G   +
Sbjct: 79  AAATVIGVWIALLVSTEGIWGKAIIFALACLPAVVPGLINAISMRIFIRTVDIPTGTAAI 138

Query: 131 LIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLL 190
           +++H    +PFVV+ V TRL      +++AA+DLGA  +V   ++ +P   PA+  G + 
Sbjct: 139 ILSHAVHAVPFVVIMVLTRLRSMPANLVDAARDLGADRFVAFLRVTIPYLMPALLGGMIF 198

Query: 191 SFTLSLDDVIISSFVTG--PTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQ 248
               S+DD + + F+ G  PT   LP+ I++ V+ G+SPE+NA+AT++LVV+  + V ++
Sbjct: 199 CVLTSIDDFVRTFFLGGYKPT---LPMLIFAKVQGGMSPEINAMATIVLVVTAAVGVYAE 255

Query: 249 LLAR 252
            L R
Sbjct: 256 HLTR 259