Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (396), Expect = 3e-43
 Identities = 82/241 (34%), Positives = 139/241 (57%), Gaps = 1/241 (0%)

Query: 13  VYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSAT 71
           V +FL  PI+ +I  SFN  +F      GF+ +WY A + +   ++A  +S+ + + S  
Sbjct: 25  VLVFLMAPILAIIPLSFNGGQFLTYPLQGFSLRWYAAFLTDPVWIRALRNSLIIGIVSTI 84

Query: 72  AATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLL 131
            AT +G+L ++ L R +F+GK +V  +L   M+ P ++ A+     F  +G    +  L+
Sbjct: 85  LATGLGTLASLGLVRAKFRGKGLVMAVLLSPMIVPVVITAVGFYLFFAPLGLTANYPGLI 144

Query: 132 IAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLS 191
           +AH     PFVV++V   L GFD+ +  AA  LGA +    +++ILPL  P VA+G L +
Sbjct: 145 LAHTVLAAPFVVISVTATLQGFDMNLARAAASLGADQVTTFRRVILPLIAPGVASGALFA 204

Query: 192 FTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLLA 251
           F  S D+V++   V GP    LP +++S ++  ISP + A+ATV+++ S +L++A + L 
Sbjct: 205 FATSFDEVVVVLLVAGPEQRTLPREMFSGIRENISPTITAVATVLILFSTLLLIALEALR 264

Query: 252 R 252
           R
Sbjct: 265 R 265