Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., spermidine/putrescine transport system permease protein PotC from Phaeobacter inhibens DSM 17395

 Score =  127 bits (319), Expect = 3e-34
 Identities = 73/248 (29%), Positives = 133/248 (53%), Gaps = 8/248 (3%)

Query: 13  VYLFLYLPIIVLIANSFNENKFG------IKWG--GFTTKWYHALMNNDSLMQAAWHSIN 64
           +++FL  PI+V++  SFN   F       I++   G++ K Y     N    QA W+SI 
Sbjct: 133 IFIFLITPILVVMPLSFNAQDFFTFTPEMIRFDPEGYSLKHYRDFFTNADWQQAMWNSIK 192

Query: 65  VAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAK 124
           +A  +   +   G+L A+ L +     ++ +  +L   M+ P I+ A  +   +  +G +
Sbjct: 193 IAPMATILSVGFGTLAAIGLSQPHVPFRRAIMAILISPMIVPLIISAAGMYFFYSRIGLQ 252

Query: 125 LGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAV 184
             +F +++AH    +PFV++TV   L GFD  +  AA ++GAG      ++ +PL  P V
Sbjct: 253 GTYFGVVLAHAALGIPFVIITVTATLVGFDRSLTRAAANMGAGPVTTFFRVQMPLILPGV 312

Query: 185 AAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLV 244
            +G L +F  S D+V++  FV     + LP +++  ++  ISP + A+AT+++VVS+ L+
Sbjct: 313 ISGGLFAFITSFDEVVVVLFVGSAGQKTLPWQMFIGLREQISPTILAVATILVVVSICLL 372

Query: 245 VASQLLAR 252
              ++L R
Sbjct: 373 TVVEMLRR 380