Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., spermidine/putrescine ABC transporter permease PotC from Pseudomonas aeruginosa PA14

 Score =  198 bits (504), Expect = 8e-56
 Identities = 94/243 (38%), Positives = 157/243 (64%)

Query: 12  LVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFSAT 71
           L + FLY+PI+VL+A SFN  +    W  F+ KWY  + N+  +++AA +S+ VA  +  
Sbjct: 19  LFFAFLYIPILVLVALSFNSGQSATLWESFSLKWYAVVANDPEILRAAKNSLIVATLATL 78

Query: 72  AATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFTLL 131
           A+T++ +L A+ +    F+G+ +++G+L + ++ P+IV A++ L  F  +G KL  FT+L
Sbjct: 79  ASTVLATLAALGMRGRAFRGQTLMNGVLGLPLLVPEIVTAVATLMFFSFIGLKLSLFTIL 138

Query: 132 IAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWLLS 191
           IAHI FC+PF  + +  RL G D ++ EAA DL A  W    KI LPL  P V +G +L+
Sbjct: 139 IAHIVFCIPFAYLPIRARLEGLDPRLAEAAADLYASPWKAFWKITLPLLMPGVLSGAMLA 198

Query: 192 FTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVASQLLA 251
           F +S+DD +I+ FV G     LP+ I+S +++GISP++NA+++++L++S+  V  S  L 
Sbjct: 199 FIISMDDFVITYFVAGAGATTLPVYIFSSIRMGISPKINAISSIILMISIAFVALSYYLG 258

Query: 252 REK 254
           + +
Sbjct: 259 QRR 261