Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., spermidine/putrescine ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score =  199 bits (505), Expect = 7e-56
 Identities = 108/264 (40%), Positives = 166/264 (62%), Gaps = 10/264 (3%)

Query: 3   RSIRFSFMSLVY--LFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAW 60
           RS  FS + LV   LFLYLP+ VLI  SFN ++    W GF+T WY  L  ++ ++ A W
Sbjct: 5   RSFSFSKVMLVLGLLFLYLPMFVLIVYSFNASRLVSVWAGFSTHWYGELFRDEQILSAVW 64

Query: 61  HSINVAVFSATAATLIGSLTAVALFRYQ-FKGKKVVSGMLFVVMMSPDIVMAISLLALFL 119
            S+ +A +SA+ A  +G+L A  + R++  +G+ ++S M+   ++ P+++  +SLL LF+
Sbjct: 65  MSLRIAFYSASMAVCLGTLCAFVITRFKKMRGRTLLSSMITAPLVMPEVITGLSLLLLFV 124

Query: 120 VMGAKLGF------FTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILK 173
            M   +G+       T+ IAH TFC  +V V V  RL   D  + EAA DLG        
Sbjct: 125 QMAQTIGWPVDRGMATIWIAHTTFCSAYVAVVVSARLQEVDRSIEEAAMDLGCTPLKTFF 184

Query: 174 KIILPLAKPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALA 233
            I LP+  PA+ +GWLL+FTLSLDD++I+SFV+GP    LP+ ++S V++G+SP++NALA
Sbjct: 185 VITLPVIAPALVSGWLLAFTLSLDDLVIASFVSGPGATTLPMVVFSSVRMGVSPKINALA 244

Query: 234 TVMLV-VSLVLVVASQLLAREKVK 256
           T+++V VSL+  +A  L+ R + K
Sbjct: 245 TLIIVAVSLIAFIAWYLMRRAEHK 268