Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., polyamine ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  278 bits (711), Expect = 8e-80
 Identities = 141/254 (55%), Positives = 186/254 (73%)

Query: 3   RSIRFSFMSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHS 62
           R +  +++ LVY FLYLPI+V+I  SFN +K+   W GFT  WY  L+ N  L+ AA +S
Sbjct: 4   RRLGMAWVWLVYAFLYLPILVVIVYSFNASKYSTAWSGFTLDWYAKLLANTPLVDAALNS 63

Query: 63  INVAVFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMG 122
           ++VA  SAT ATL+GSL A+ L RY+F G+KV+   ++V+ +SPDIVM ISLL  F+ + 
Sbjct: 64  LSVATLSATLATLLGSLAAMCLHRYRFPGRKVLHSSIYVLTVSPDIVMGISLLIFFIALR 123

Query: 123 AKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKP 182
            +LGF TLLIAH T  LPFV VTV  RL  FD  ++EAA+DLGA E    + IILPL  P
Sbjct: 124 MELGFVTLLIAHTTLGLPFVTVTVLARLAEFDEHLVEAARDLGASEAAAYRHIILPLTLP 183

Query: 183 AVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLV 242
           AVAAGWLLSFTLS+DDV+IS FVTGP++E+LPLKIYSMV++G+ P++NAL+ VM  V++V
Sbjct: 184 AVAAGWLLSFTLSMDDVLISFFVTGPSFEVLPLKIYSMVRLGVKPDINALSAVMFGVTIV 243

Query: 243 LVVASQLLAREKVK 256
           LV+ +Q L   + K
Sbjct: 244 LVLLAQALTNMRRK 257