Pairwise Alignments

Query, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., spermidine/putrescine transport system permease protein potC from Caulobacter crescentus NA1000

 Score =  202 bits (514), Expect = 6e-57
 Identities = 101/247 (40%), Positives = 161/247 (65%), Gaps = 7/247 (2%)

Query: 8   SFMSLVYLFLYLPIIVLIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVAV 67
           ++++ V++FLY P+I L+A SFN++K  I W GFT K+Y  L NN  L++A  +S+ +A 
Sbjct: 26  AWLAAVFIFLYAPLIALMAFSFNDSKRNIVWKGFTLKYYEKLFNNSELLEAFGNSLTIAA 85

Query: 68  FSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLV------- 120
            S   +  +G+  A+AL+R++F GK  V G + + ++ P+I M +++L  F         
Sbjct: 86  ASTVISLFLGAAVALALWRFRFPGKTAVDGAMALPIVVPEICMGVAMLVFFAKVLPWPQG 145

Query: 121 MGAKLGFFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLA 180
           M   L    ++IAH++F  PFV V V  R+  F+ +M EAA+DLGAGE+  +K +ILP  
Sbjct: 146 MPWPLNLGAIIIAHVSFSFPFVAVVVRARMASFNREMEEAARDLGAGEFRTIKDVILPHM 205

Query: 181 KPAVAAGWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVS 240
            P++ AG LL+FTLSLDD +I+ F  GP     P+K+YSMV+  ++PEVNA +TV++V++
Sbjct: 206 APSLIAGALLAFTLSLDDFVITFFTAGPDTVTFPVKVYSMVRFSVTPEVNAASTVLIVLT 265

Query: 241 LVLVVAS 247
           ++L  A+
Sbjct: 266 VLLTAAA 272