Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (363), Expect = 3e-39
 Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 18/302 (5%)

Query: 15  LSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKTHNQ 74
           L L+  TA A D   ++ NW  YI    L+ FT +TG +  Y  Y+SNE L AKL   + 
Sbjct: 8   LLLIVSTAQAADTVRIY-NWSSYIAPDTLQNFTTQTGHQTQYDLYDSNEVLDAKLMAGHS 66

Query: 75  GYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNNDYSIPHVVAI 132
           GYD+V PS +F+A+    G L+ +D+SKL N+ NL+   +   +  DP N Y  P++   
Sbjct: 67  GYDVVFPSNHFMARQITAGALKPLDRSKLPNWHNLNPTLMKVLEANDPGNRYGFPYLWGS 126

Query: 133 TGLAVNT----DMYDPNDFQSWGDLWKPELKGQL-----MLMDDTREVFHIALRKLGYSG 183
           TG+  N      +       SW  ++KPE   +L      ++D+  E+  IAL  LG   
Sbjct: 127 TGIGYNVAKVKAVLGDVPIDSWDIVFKPENMKKLARCGVAMLDNGPEILPIALNYLGLPH 186

Query: 184 NSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG---SAAAAQKE-- 238
           +S D    ++A A L K+ P V  F++    +   +G+V L + ++G    AAA   E  
Sbjct: 187 HSKDKADYEKAQALLLKVRPYVSYFHNSKYTSDLATGDVCLVVGFSGDVMQAAARANEAG 246

Query: 239 -GLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVK 297
            G  I    PKEG   W D  A+ + A N  A ++ +++LL P++   IS    Y  G  
Sbjct: 247 NGQQIAYAIPKEGSPMWFDMVAMPADAPNEGAGYEFLNYLLDPKVMAGISNHVHYANGNT 306

Query: 298 AS 299
           A+
Sbjct: 307 AA 308