Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (422), Expect = 5e-46
 Identities = 109/318 (34%), Positives = 172/318 (54%), Gaps = 21/318 (6%)

Query: 1   MKKLA-TLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTY 59
           MKK   TLLA S   + +++  A A+DK L   NW  YI    + +F KE+GIKV+Y  +
Sbjct: 1   MKKFGKTLLALSL--MGVVATAAQADDKVLHVYNWSDYIAPDTIAKFEKESGIKVVYDVF 58

Query: 60  ESNETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KP 117
           +SNETL AKL     GYD+VVPS  F+AK    G+ Q++DKSKL N+KNL+ + L     
Sbjct: 59  DSNETLEAKLLAGKSGYDVVVPSNNFLAKQIKAGVYQELDKSKLPNWKNLNESLLKAVSV 118

Query: 118 YDPNNDYSIPHVVAITGLAVNTD-----MYDPNDFQSWGDLWKPELKGQL-----MLMDD 167
            DP+N Y+ P++    G+ +N D     +       SW  L+KPE   +L       +D 
Sbjct: 119 SDPDNKYAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKLKSCGISFLDS 178

Query: 168 TREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGML 227
             E+  IAL  L Y  +S D KQ+ +A      + P++  F+S    +   +G + + + 
Sbjct: 179 PTEMLPIALHYLDYPTDSQDKKQLAKAEELFMTIRPSIGYFHSSKYISDLANGNICVAVG 238

Query: 228 WNG----SAAAAQKEGLPIKLVF--PKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPE 281
           ++G    + + A + G  +K+ +  PK+G   + D  AI   A+NV+ A+K ++FL+RPE
Sbjct: 239 YSGDIYQAKSRAAEAGGKVKVAYNIPKKGAGSFYDMVAIPKDAQNVEGAYKFMNFLMRPE 298

Query: 282 IAEQISRDTGYLTGVKAS 299
           +  +I+    +  G  A+
Sbjct: 299 VMAEITNAVRFPNGNAAA 316