Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (431), Expect = 5e-47
 Identities = 116/359 (32%), Positives = 178/359 (49%), Gaps = 26/359 (7%)

Query: 7   LLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66
           LLA +   L+L     A  +  +   NW  YI    L  F   TGIK +Y  ++SNETL 
Sbjct: 10  LLAAAGLTLTL----GAQAESTVHIYNWSDYIGKTTLADFEATTGIKPMYDVFDSNETLE 65

Query: 67  AKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDK--PYDPNNDY 124
           AKL     GYD+VVPS +F+ K    G  QK+DKS L N+KNLD   L +    DP N Y
Sbjct: 66  AKLLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLPNYKNLDPALLKRLEKNDPGNQY 125

Query: 125 SIPHVVAITGLAVNTD----MYDPNDFQSWGDLWKPELKGQL-----MLMDDTREVFHIA 175
           ++P++    G+  N +    +   +   SW  L++PE   +L       +D   E+    
Sbjct: 126 AVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSADEMLPAV 185

Query: 176 LRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG----S 231
           L  LG   NST +    EA A+L  + P V  F+S        +G++ +   ++G    +
Sbjct: 186 LNYLGLDPNSTKEADYKEAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQA 245

Query: 232 AAAAQKEGLPIKLVF--PKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRD 289
            A A++ G  +KL +  PKEGG  W D  AI + +KN+  A   I+++L P +  ++S +
Sbjct: 246 KARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSKNIKQASAFINYMLDPRVIAKVSDE 305

Query: 290 TGYLTGVKASND----KFQDVAPLFPSQEDLDRVEWQSAVGDKTVK-YEEYFMKLKAGQ 343
            GY     AS +    K +  A ++P QE LDR+   S +  K  +     + K+K+G+
Sbjct: 306 VGYANPNPASGEFMDQKIRTDAAVYPPQEVLDRLFVNSELPLKVQRLMTRSWTKVKSGE 364