Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score =  138 bits (347), Expect = 2e-37
 Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 7   LLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66
           +L  S  AL LL+ T+ A +   ++ NW  YI    L+ F   TG K  Y T+E+NE L 
Sbjct: 1   MLKKSLAALVLLASTSHAAETVNIY-NWTDYIAPDTLKNFEAATGFKTTYETFETNEALN 59

Query: 67  AKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNNDY 124
           AKL   + G+D+V PS +F+ +    G+L+ +DK +L N+KNL+   L   +  DP N +
Sbjct: 60  AKLLAGHSGHDVVFPSIHFMGRQIQSGLLKTLDKRQLPNWKNLNPVLLKALEGSDPGNQH 119

Query: 125 SIPHVVAITGLAVNTD-----MYDPNDFQSWGDLWKPELKGQL-----MLMDDTREVFHI 174
             P++   TG+  +T      +       SW  + KPE   +L     + +D    +  I
Sbjct: 120 GFPYLWGSTGIGYDTTKVKAILGKDAPLDSWDLVLKPENMKKLAQCGVVFLDSAPALLPI 179

Query: 175 ALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAA 234
            L  LG   +S       +A A L  + P V  F+S +  A    G + + + ++G  + 
Sbjct: 180 TLNYLGLPPHSEVPDDYRQAKAVLDSVRPYVRNFSSADYIADLAKGRICVAVGYSGDISQ 239

Query: 235 AQKE------GLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISR 288
           AQ++      G+ I    PKEG   W D  AI + A ++  A+  +++LLRPE+   I+ 
Sbjct: 240 AQEQAQKEGNGITIDYAVPKEGAPMWFDMVAIPADATDIKGAYAFLNYLLRPEVIANITN 299

Query: 289 DTGYLTG 295
              Y  G
Sbjct: 300 TVHYANG 306