Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., polyamine ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  162 bits (411), Expect = 9e-45
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 19/307 (6%)

Query: 6   TLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETL 65
           TLLA S   +  ++G A A+DK L   NW  YI    +  F KE+GIKV+Y  ++SNETL
Sbjct: 7   TLLALSL--MGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETL 64

Query: 66  YAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNND 123
            AKL     GYD+VVPS  F+AK    G+ Q++DK+KLSN+ NL+ + L      DP+N 
Sbjct: 65  EAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKTKLSNYDNLNKSLLKAVSVSDPDNK 124

Query: 124 YSIPHVVAITGLAVNTDMYDP----NDFQSWGDLWKPELKGQL-----MLMDDTREVFHI 174
           ++ P++    G+  N +        +   SW  L KPE   +L       +D   E+  I
Sbjct: 125 HAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPI 184

Query: 175 ALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG---- 230
           AL  LG   +S     + +A A   K+ P++  F+S    +   +G + + + ++G    
Sbjct: 185 ALHYLGLPTDSQKKDDLKQAEALFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIQQ 244

Query: 231 SAAAAQKEGLPIKLVF--PKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISR 288
           + + A + G  +K+ +  PKEG   + D  AI   A+NVDAA+K +++LL+PE+   I+ 
Sbjct: 245 AKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPEVMASITN 304

Query: 289 DTGYLTG 295
              +  G
Sbjct: 305 SVRFPNG 311