Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., extracellular solute-binding protein family 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  293 bits (750), Expect = 5e-84
 Identities = 155/341 (45%), Positives = 216/341 (63%), Gaps = 6/341 (1%)

Query: 8   LAGSACALSLLSGTA-AAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66
           LA +  A +L +G A AAE+K L   NW  Y+   +L++FTKETGIKV+Y+TYESNE +Y
Sbjct: 17  LALAVLAATLFAGPAVAAEEKVLHVYNWSEYVPQSVLDRFTKETGIKVVYTTYESNEAMY 76

Query: 67  AKLKT-HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYS 125
           AK+K     GYD+VVPSTYF++ MRD+G+L +IDKSKL NFKNL    L++P+DP N+YS
Sbjct: 77  AKVKLLKGVGYDVVVPSTYFISMMRDDGLLARIDKSKLKNFKNLSPKVLNQPFDPGNEYS 136

Query: 126 IPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNS 185
           +P++    GL VN  + DP    SW DL +PE  G+++L DD R+   +AL+ LGYS NS
Sbjct: 137 VPYMWGSAGLMVNRKVVDPASITSWNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNS 196

Query: 186 TDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLV 245
           T++ +I  AY  L+KL+P V VF+       ++S EV  G++WNG A  A  E   +  V
Sbjct: 197 TNEAEIKAAYEWLKKLLPAVRVFDVTASKQAFISEEVAAGLIWNGDAYIAASENENLVYV 256

Query: 246 FPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLT----GVKASND 301
           +P+EG   WVD+ AI  GAK+ D AHK IDFLLRP++A++   +  Y T      K  + 
Sbjct: 257 YPREGVPLWVDSLAIPVGAKHKDNAHKFIDFLLRPDVAKECVEEYNYSTPNVGAQKILSP 316

Query: 302 KFQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLKAG 342
           +        PS  DL   E+ ++VG+    YE+Y+  LK G
Sbjct: 317 ELAKSRITSPSDADLKNAEFTNSVGNALEIYEKYWEMLKTG 357