Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  282 bits (722), Expect = 8e-81
 Identities = 153/339 (45%), Positives = 209/339 (61%), Gaps = 6/339 (1%)

Query: 8   LAGSACALSLLSGTA-AAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLY 66
           L  +   L L +G A +AE K L   NW  Y+   +L++FTKETGIKV+Y+TYESNE +Y
Sbjct: 4   LLATVVMLLLWTGVAVSAEPKVLNVFNWSEYVPQTVLDRFTKETGIKVVYTTYESNEAMY 63

Query: 67  AKLKT-HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYS 125
           AK+K    +GYD+VVPSTYF+  MR +G+L KID++KL+N+ NLD   L +P+DP N++S
Sbjct: 64  AKIKLLRGKGYDIVVPSTYFIDMMRKDGLLAKIDRAKLTNYANLDPRVLHQPFDPQNEFS 123

Query: 126 IPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKLGYSGNS 185
           +P++   TGL VN  + DP    SW DL++PE KG ++L DD R+ F IAL+ LGYS NS
Sbjct: 124 VPYMWGNTGLMVNRKVVDPATISSWNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNS 183

Query: 186 TDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLV 245
           T + +I  AY  L KL P+V VF+       +++ EV  GM WNG A  A  E   +  V
Sbjct: 184 TSEAEIKAAYEWLLKLKPSVRVFDVTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFV 243

Query: 246 FPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIA----EQISRDTGYLTGVKASND 301
           +PKEG   WVD+ AI  GA++ D AHK IDFLLRP+IA    E+ +  T  L   K  + 
Sbjct: 244 YPKEGLPLWVDSLAIPIGAEHKDNAHKFIDFLLRPDIAKLCVEEYNYSTPNLAAQKILDA 303

Query: 302 KFQDVAPLFPSQEDLDRVEWQSAVGDKTVKYEEYFMKLK 340
           +        P+  DL   E+ + VG     YE+Y+  LK
Sbjct: 304 RHAQSRATSPTDADLKNSEFTNGVGKALDVYEKYWEMLK 342