Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., spermidine/putrescine-binding protein from Caulobacter crescentus NA1000

 Score =  171 bits (434), Expect = 2e-47
 Identities = 103/328 (31%), Positives = 172/328 (52%), Gaps = 15/328 (4%)

Query: 24  AEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKTHNQGYDLVVPST 83
           AE+ +L F NW  YI    L  F K TGI V  S + +N+ L+AKLK  N G+D+VVPS 
Sbjct: 45  AEEAKLNFYNWDTYIGETTLGDFKKATGIDVNMSLFATNDELFAKLKAGNPGFDVVVPSN 104

Query: 84  YFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYD 143
            FV +M   G+L+ +D +K+ N KN+D ++L+  +DP   +S+P+   + G+      Y 
Sbjct: 105 EFVTRMSQGGLLEPLDHAKIPNMKNIDPSFLNPEFDPGRKFSMPYTWLLLGIG-----YR 159

Query: 144 PNDFQSWGDLWK-----PELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAEL 198
            +  +   D WK      + KG++ L+ ++ ++  ++ + LG+S N+     + +    L
Sbjct: 160 KSKVKGVPDSWKWLFDSDQYKGRIALLSESADLVRLSAKYLGHSVNNIPQDMLPKIEQML 219

Query: 199 QKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPKEGGIGWVDNF 258
            K  P V  F+ DN     +SGEV L + +NG  A A KE   +  V PKEG +   D  
Sbjct: 220 IKQKPFVKAFHDDNGQDMLMSGEVDLVLEYNGDIAQAMKEDPDLDFVVPKEGSLINSDTL 279

Query: 259 AISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGVKASN----DKFQDVAPLFPSQE 314
            I  GA   + AH  I++LL  +   +IS+   Y T   A+     + +++   +FP  +
Sbjct: 280 CIPKGAPRPNNAHAFINYLLDAQAGAEISKTILYPTPNAAAKALMPEDYKNNPVIFPPAD 339

Query: 315 DLDRVEWQSAVG-DKTVKYEEYFMKLKA 341
            + + E+ +  G +K  +YEE   +++A
Sbjct: 340 VMAKCEYGAFEGAEKASQYEELITRVRA 367