Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  137 bits (346), Expect = 3e-37
 Identities = 92/340 (27%), Positives = 162/340 (47%), Gaps = 24/340 (7%)

Query: 4   LATLLAGSACALSLLSG--TAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYES 61
           L +L     C+L+ L+    A A D  L   NW  YI    +  F K++G+ V Y +Y+S
Sbjct: 8   LLSLAGTMLCSLTALTAMNAARAADTSLNVYNWSDYIAKDTIANFEKQSGVTVKYDSYDS 67

Query: 62  NETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNY--LDKPYD 119
           ++TL AKL   + GYD+VVP++ ++A+  + G+ QKIDKSK+ N  NLD     L    D
Sbjct: 68  DDTLQAKLLAGSSGYDIVVPTSSYMARQIEAGVYQKIDKSKMPNLANLDPGLMKLIADAD 127

Query: 120 PNNDYSIPHVVAITGL-----AVNTDMYDPNDFQSWGDLWKPELKGQ-----LMLMDDTR 169
           P N Y +P      G+     AV   +       SW  L+ P    +     +  +D   
Sbjct: 128 PGNQYGVPWAWGTDGIGYNVQAVKQALGGEAPVDSWSLLFDPANLSKVKSCGVSFLDSAA 187

Query: 170 EVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWN 229
           +VF   L+ +  + NST+      AY  L+K+ P +  FNS        + ++ +   ++
Sbjct: 188 DVFPAVLQYMHKNPNSTNPGDYQAAYEVLKKVRPYITQFNSSGYINDLANNDICVAFGFS 247

Query: 230 GSAAAAQKEGLPIKLVFP------KEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIA 283
           G    A++     K  +       K+ G+ W+D   I   A + +AA K ++++  P+++
Sbjct: 248 GDVGIARRRASEAKRTYEVRFSNIKDAGLVWMDVMVIPKDAPHPEAAMKWMNYIEDPKVS 307

Query: 284 EQISRDTGYLTGVKASND----KFQDVAPLFPSQEDLDRV 319
            +I+ +  Y T  +A+        +  A ++P +  L+++
Sbjct: 308 AEITNEVFYPTANRAARQFVTPAIEQDANVYPPEAVLNKM 347