Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  149 bits (375), Expect = 1e-40
 Identities = 112/364 (30%), Positives = 167/364 (45%), Gaps = 30/364 (8%)

Query: 5   ATLLAGSACALSLLSGTAAAEDKELVFMNWGPYINSGILEQFTKETGIKVIYSTYESNET 64
           A LLA +  A +L    A A D EL   NW  YI    +  F K+ GIKV Y  Y+S++T
Sbjct: 13  AALLAFTGFA-ALSVTPALAADTELNVYNWSDYIAKDTISNFEKQDGIKVKYDNYDSDDT 71

Query: 65  LYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLD--KPYDPNN 122
           L AKL   + GYD+VVP++ ++AK    G+ QK+DKSKL N  NLD   +      DP N
Sbjct: 72  LQAKLLAGSSGYDIVVPTSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMIADADPGN 131

Query: 123 DYSIPHVVAITGLAVNTDMYDP-----NDFQSWGDLWKP----ELKG-QLMLMDDTREVF 172
            Y +P      G+  N               SW  ++ P    +LKG  + ++D   +VF
Sbjct: 132 QYGVPWAYGTDGIGYNVQAVQKALGANAPVDSWALVFDPANLSKLKGCGVSILDQAVDVF 191

Query: 173 HIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSA 232
              L+ +    NST+      AY  L+K+ P +  FNS        + +V +   W+G  
Sbjct: 192 AATLQYMHKDPNSTNPADYQAAYEVLKKIRPYITQFNSSGYINDLANNDVCVAFGWSGDV 251

Query: 233 AAAQ------KEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286
             A       K    IK    KEGG+ W D   I   A + +AA K I+++  P++   I
Sbjct: 252 GIASRRTEEAKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAALKWINYISDPKVNAAI 311

Query: 287 SRDTGYLTGVKASNDKFQDVAP-------LFPSQEDLDRVEWQSAVGDKTVKYE-EYFMK 338
           + +  Y T  KA+    Q V P       ++P  E L ++     +    ++ E   + +
Sbjct: 312 TNEVFYPTANKAAR---QFVTPAVAQDKTVYPGDEVLSKMTLMKPMPTDILRLENRLWAQ 368

Query: 339 LKAG 342
           LK G
Sbjct: 369 LKTG 372