Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  206 bits (524), Expect = 8e-58
 Identities = 108/327 (33%), Positives = 183/327 (55%), Gaps = 17/327 (5%)

Query: 10  LCAAALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKT 69
           L  A L    ++     ++ YNWS+YI    L DF K TGIK +Y  ++SNE++  KL  
Sbjct: 12  LVGAGLTLAVSVQAASTVHIYNWSDYIGETTLADFEKATGIKPVYDVFDSNETLEGKLLA 71

Query: 70  QGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNK--PFDPGNKFSIPYI 127
              GYD+VVPS +F+ K  K G  Q++D ++L ++ +LDP  L +    DPGN++++PY+
Sbjct: 72  GRTGYDVVVPSNHFLGKQIKAGAFQKLDKAQLPNYANLDPVLLKRLEKNDPGNQYAVPYL 131

Query: 128 WGATGIGINTD----MLDKKSLKNWGDLWDAKWAGQL-----MLMDDAREVFHIALSKLG 178
           WG  GIG N +    +L    + +W  L++ +   +L       +D   E+    L+ LG
Sbjct: 132 WGTNGIGYNVEKIKAVLGVDKIDSWAMLFEPENIKKLSNCGVSFLDSGDEMIPAMLNYLG 191

Query: 179 YSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQ--- 235
            +PN+ +P++ K A  +L K+ P V  FNS    +    GE+ +   ++G  + AR+   
Sbjct: 192 LNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGFSGDIFQARERAS 251

Query: 236 ---EGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPT 292
              +G  I  + P++G   W D ++IP  A N++ AH  I+++L+PE  A+++  +GY  
Sbjct: 252 EAGKGVEIAYVIPKEGGNLWFDMLAIPRDATNVKQAHAFINYVLKPEVIAQVSDTVGYAN 311

Query: 293 PVKTAHDLLPKEFANDPSIYPPQSVID 319
           P   A +L+ ++   D ++YPPQ+V+D
Sbjct: 312 PNPKAGELMDQKVRTDEAVYPPQAVVD 338