Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (501), Expect = 4e-55
 Identities = 114/335 (34%), Positives = 186/335 (55%), Gaps = 21/335 (6%)

Query: 4   KLFASALCAAALF---TTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESN 60
           K F   L A +L     T A A D+ L+ YNWS+YI  + +  F KE+GIKV+Y  ++SN
Sbjct: 2   KKFGKTLLALSLMGVVATAAQADDKVLHVYNWSDYIAPDTIAKFEKESGIKVVYDVFDSN 61

Query: 61  ESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLN--KPFDP 118
           E++ AKL    +GYD+VVPS  F++K  K G+ QE+D SKL ++K+L+ + L      DP
Sbjct: 62  ETLEAKLLAGKSGYDVVVPSNNFLAKQIKAGVYQELDKSKLPNWKNLNESLLKAVSVSDP 121

Query: 119 GNKFSIPYIWGATGIGINTDMLD-----KKSLKNWGDLWDAKWAGQL-----MLMDDARE 168
            NK++ PY+WG+ GIGIN D +         + +W  L+  + A +L       +D   E
Sbjct: 122 DNKYAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKLKSCGISFLDSPTE 181

Query: 169 VFHIALSKLGYSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNG 228
           +  IAL  L Y  ++ + K++  A      + P++  F+S    +    G + + + ++G
Sbjct: 182 MLPIALHYLDYPTDSQDKKQLAKAEELFMTIRPSIGYFHSSKYISDLANGNICVAVGYSG 241

Query: 229 SAYMAR----QEGAPIQIIW--PEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAA 282
             Y A+    + G  +++ +  P+KG   + D ++IP  A+N+E A+K ++FL+RPE  A
Sbjct: 242 DIYQAKSRAAEAGGKVKVAYNIPKKGAGSFYDMVAIPKDAQNVEGAYKFMNFLMRPEVMA 301

Query: 283 KIALEIGYPTPVKTAHDLLPKEFANDPSIYPPQSV 317
           +I   + +P     A  L+ KE  +DP +YPP  V
Sbjct: 302 EITNAVRFPNGNAAATALVDKEITSDPGVYPPADV 336