Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., putrescine-binding periplasmic protein PotF from Phaeobacter inhibens DSM 17395

 Score =  170 bits (430), Expect = 6e-47
 Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 18/326 (5%)

Query: 13  AALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKTQGA 72
           A +  ++A A  +E+  YNWS+YI  ++LE F  ETGI +IY  ++SNE +  K+   G+
Sbjct: 10  AIVALSSAAAVAEEVRVYNWSDYIDEDLLEKFETETGIDLIYDVFDSNELLETKMLAGGS 69

Query: 73  GYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKP--FDPGNKFSIPYIWGA 130
           GYD+VVP+  F+++  + G  Q++D SKLS+  ++     ++   +DP N +S+ Y+WG 
Sbjct: 70  GYDVVVPTGSFLARQIQAGAFQKLDTSKLSNAGNMWDVIEDRTARYDPDNLYSVNYMWGT 129

Query: 131 TGIGINTDM----------LDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYS 180
           TGIG NT            +D   L    D  +      +  +D   E+   AL  +G  
Sbjct: 130 TGIGANTAKVEEALGADAPIDSLELVFNPDNIEKLANCGVYFLDAPDEMIPAALKYIGED 189

Query: 181 PNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMAR------ 234
           PN+ +P  +  A   L  + P V  F+S    N    G++ +   W+G    AR      
Sbjct: 190 PNSMDPDVVAKAEPVLMAIRPYVKKFHSSEYINALANGDICVAFGWSGDILQARDRADEA 249

Query: 235 QEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPV 294
             G  I    P++G + W D ++IP  A N + AHK ++F++  EN A  +  + Y    
Sbjct: 250 DNGVEIVFNAPKEGALMWFDQMAIPVDAPNPDGAHKFLNFIMEAENMAAASNYVYYANGN 309

Query: 295 KTAHDLLPKEFANDPSIYPPQSVIDN 320
           K + + L ++   DP+IYP +  + N
Sbjct: 310 KASQEFLEEDVIGDPAIYPSEETLKN 335