Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  189 bits (479), Expect = 1e-52
 Identities = 113/337 (33%), Positives = 180/337 (53%), Gaps = 24/337 (7%)

Query: 4   KLFASALCAAALFTTNA---MAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESN 60
           K + + L   AL   +A    A+ + L+ YNWS+YI  + + +F KETGIKV+Y  ++SN
Sbjct: 6   KKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSN 65

Query: 61  ESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLN--KPFDP 118
           E +  KL     G+DLVVPS  F+ +    G+ Q +D SKL ++K+LDP  L      DP
Sbjct: 66  EVLEGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDP 125

Query: 119 GNKFSIPYIWGATGIGINTD----MLDKKS-LKNWG------DLWDAKWAGQLMLMDDAR 167
            NK++IPY+W  TGIG N D    +L K + L +W       +L   K  G +  +D   
Sbjct: 126 DNKYAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCG-VSFLDAPE 184

Query: 168 EVFHIALSKLGYSPNTTNPKEIKAAYRE-LKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226
           E+F   L+ LG  PN++   +      + L KL PN+  F+S    N    G++ + + W
Sbjct: 185 EIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGW 244

Query: 227 NGSAYMA------RQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPEN 280
            G  + A       + G  +    P++G + + D  ++PA AKN + A++ +++L+RP+ 
Sbjct: 245 AGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDV 304

Query: 281 AAKIALEIGYPTPVKTAHDLLPKEFANDPSIYPPQSV 317
            A I+  + Y    K +  L+ +E  N+P+IYPP  V
Sbjct: 305 IAHISDHVYYANGNKASLPLVSEEIRNNPAIYPPADV 341