Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., Putrescine-binding periplasmic protein from Enterobacter sp. TBS_079

 Score =  194 bits (493), Expect = 3e-54
 Identities = 116/340 (34%), Positives = 180/340 (52%), Gaps = 28/340 (8%)

Query: 3   NKLFASALCAAALFTTNA---MAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYES 59
           NK + S L A AL   +A    A+ + L+ YNWS+YI  + + +F KETGIKV+Y  ++S
Sbjct: 5   NKKWLSGLVAGALMAVSAGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDS 64

Query: 60  NESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLN--KPFD 117
           NE +  KL     G+DLVVPS  F+ +    G+ Q +D SKL ++K+LDP  L      D
Sbjct: 65  NEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKHD 124

Query: 118 PGNKFSIPYIWGATGIGINTDMLDK---KSLKNWGDLWDA----------KWAGQLMLMD 164
           P NK+++PY+W  TGIG N D +     K +K   D WD           K  G +  +D
Sbjct: 125 PDNKYAMPYLWATTGIGYNVDKVKAVLGKDVKL--DSWDVVLKPENLEKLKSCG-VSFLD 181

Query: 165 DAREVFHIALSKLGYSPNTTNPKEIKAAYRE-LKKLMPNVLVFNSDFPANPYLAGEVSLG 223
              E+F   L+ LG  PN++   +      + L KL PN+  F+S    N    G++ + 
Sbjct: 182 APEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241

Query: 224 MLWNGSAYMA------RQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLR 277
           + W G  + A       + G  +    P++G + + D  ++PA AKN + A++ +++L+R
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMR 301

Query: 278 PENAAKIALEIGYPTPVKTAHDLLPKEFANDPSIYPPQSV 317
           PE  A I+  + Y    K +  L+ +E  N+P+IYPP  V
Sbjct: 302 PEVIAHISDHVYYANGNKASVPLVSEEIRNNPAIYPPADV 341