Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  310 bits (794), Expect = 3e-89
 Identities = 150/325 (46%), Positives = 220/325 (67%), Gaps = 1/325 (0%)

Query: 22  AKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKT-QGAGYDLVVPS 80
           A+ + L  +NWSEY+P  VL+ FTKETGIKV+Y+TYESNE+MYAK+K  +G GYD+VVPS
Sbjct: 21  AEPKVLNVFNWSEYVPQTVLDRFTKETGIKVVYTTYESNEAMYAKIKLLRGKGYDIVVPS 80

Query: 81  TYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSIPYIWGATGIGINTDML 140
           TYF+  MRK+G+L +ID +KL+++ +LDP  L++PFDP N+FS+PY+WG TG+ +N  ++
Sbjct: 81  TYFIDMMRKDGLLAKIDRAKLTNYANLDPRVLHQPFDPQNEFSVPYMWGNTGLMVNRKVV 140

Query: 141 DKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYSPNTTNPKEIKAAYRELKKLM 200
           D  ++ +W DL+  ++ G ++L DD R+ F IAL  LGYS N+T+  EIKAAY  L KL 
Sbjct: 141 DPATISSWNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNSTSEAEIKAAYEWLLKLK 200

Query: 201 PNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIWPEKGTIFWMDSISIPA 260
           P+V VF+       ++A EV  GM WNG A++A  E   +  ++P++G   W+DS++IP 
Sbjct: 201 PSVRVFDVTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSLAIPI 260

Query: 261 GAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLPKEFANDPSIYPPQSVIDN 320
           GA++ + AHK IDFLLRP+ A     E  Y TP   A  +L    A   +  P  + + N
Sbjct: 261 GAEHKDNAHKFIDFLLRPDIAKLCVEEYNYSTPNLAAQKILDARHAQSRATSPTDADLKN 320

Query: 321 GEWQDEVGEASVLYDEYFQKLKVND 345
            E+ + VG+A  +Y++Y++ LK  D
Sbjct: 321 SEFTNGVGKALDVYEKYWEMLKTAD 345