Pairwise Alignments

Query, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., spermidine/putrescine-binding protein from Caulobacter crescentus NA1000

 Score =  206 bits (524), Expect = 8e-58
 Identities = 111/323 (34%), Positives = 186/323 (57%), Gaps = 3/323 (0%)

Query: 22  AKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESMYAKLKTQGAGYDLVVPST 81
           A++ +L FYNW  YI    L DF K TGI V  S + +N+ ++AKLK    G+D+VVPS 
Sbjct: 45  AEEAKLNFYNWDTYIGETTLGDFKKATGIDVNMSLFATNDELFAKLKAGNPGFDVVVPSN 104

Query: 82  YFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSIPYIWGATGIGINTDMLD 141
            FV++M + G+L+ +DH+K+ + K++DP++LN  FDPG KFS+PY W   GIG     + 
Sbjct: 105 EFVTRMSQGGLLEPLDHAKIPNMKNIDPSFLNPEFDPGRKFSMPYTWLLLGIGYRKSKV- 163

Query: 142 KKSLKNWGDLWDA-KWAGQLMLMDDAREVFHIALSKLGYSPNTTNPKEIKAAYRELKKLM 200
           K    +W  L+D+ ++ G++ L+ ++ ++  ++   LG+S N      +    + L K  
Sbjct: 164 KGVPDSWKWLFDSDQYKGRIALLSESADLVRLSAKYLGHSVNNIPQDMLPKIEQMLIKQK 223

Query: 201 PNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIWPEKGTIFWMDSISIPA 260
           P V  F+ D   +  ++GEV L + +NG    A +E   +  + P++G++   D++ IP 
Sbjct: 224 PFVKAFHDDNGQDMLMSGEVDLVLEYNGDIAQAMKEDPDLDFVVPKEGSLINSDTLCIPK 283

Query: 261 GAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLPKEFANDPSIYPPQSVIDN 320
           GA     AH  I++LL  +  A+I+  I YPTP   A  L+P+++ N+P I+PP  V+  
Sbjct: 284 GAPRPNNAHAFINYLLDAQAGAEISKTILYPTPNAAAKALMPEDYKNNPVIFPPADVMAK 343

Query: 321 GEW-QDEVGEASVLYDEYFQKLK 342
            E+   E  E +  Y+E   +++
Sbjct: 344 CEYGAFEGAEKASQYEELITRVR 366