Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  276 bits (707), Expect = 8e-79
 Identities = 159/438 (36%), Positives = 246/438 (56%), Gaps = 10/438 (2%)

Query: 8   LQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQGDVSSFA 67
           L  ++ L+W   L+++L+G G+ FT R G +QFR        +FG      + G +SSF 
Sbjct: 2   LDLLNDLIWSKLLIVMLIGLGLLFTIRSGFVQFRYFGNMFT-IFGHAFER-QPGQLSSFQ 59

Query: 68  ALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYRQIDDK 127
           AL  +++  +G GNI GV+ AI LGGPGA+FWMW+ AL GMAT Y EC LA  Y++ +  
Sbjct: 60  ALMLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMATSYFECSLAQLYKRREPD 119

Query: 128 GQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFGIGTFPQVNAILDATQISFGVPREAS 187
           G   GGP +Y++ G+  + L ++ ++  +    FG     Q   +  +   +FGVP  AS
Sbjct: 120 GTYRGGPAFYIQHGLGQRWLGIVVSILLLMTFGFGFNAV-QSFTVASSLHDTFGVPTVAS 178

Query: 188 AVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADAVELVLVSA 247
            + LT+++A +  GGI+ IAK A  +VP MA  Y+   L VI +N   + +   L+  SA
Sbjct: 179 GIALTLVIAGIIFGGIRRIAKWADVLVPVMAFSYLAMALFVIGSNFSAIPETFGLIFRSA 238

Query: 248 FTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVEQGLISMTGT 307
           F    A  G +GA+I++    G+ RG+FSNE+GLGSAP  AA A+    V QG++     
Sbjct: 239 FGLEQAFAGGIGAAILM----GVKRGLFSNEAGLGSAPNVAAVAEVKHPVAQGIVQSLSV 294

Query: 308 FFDTIIICTMTGLALILTGAWQSDLSGAAMTTYAFATGLNAQTIGPMLVSIGLMFFAFTT 367
           F DTII+C+ T L ++L+G ++  +  A +     A        G + VS+ L+ F FTT
Sbjct: 295 FIDTIILCSCTALIILLSGVYEPGMDQAGVVLTQTAVAAVVGEWGRVFVSVALLLFVFTT 354

Query: 368 ILGWNYY-GERCMVFLFGTK-AVLPYKIVFIGLIASGAFLHLDLIWIIADIVNGLMAIPN 425
           ++ +NYY GE  + F    +  V+ Y+I+ + L+  G+   L  ++  AD+  GL+AI N
Sbjct: 355 LI-YNYYLGENALGFFTEKRMPVVIYRILVVILVLWGSVQDLGTVFAFADVTMGLLAIAN 413

Query: 426 LIGLVALRHVVVEETKQY 443
           LI +  L  V +   + Y
Sbjct: 414 LIAVALLFKVGLRLMRDY 431