Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  450 bits (1157), Expect = e-131
 Identities = 227/448 (50%), Positives = 313/448 (69%), Gaps = 6/448 (1%)

Query: 1   MNNLQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVF-GREKSSDK 59
           M  L + + +V+ LVWGPP+L+L++GTG++    L  +   R+PT  A+++ GR K  + 
Sbjct: 1   MEFLNNLVNSVNGLVWGPPMLVLILGTGLFLMIFLKFMPLTRIPTGFALMWRGRTKGDEA 60

Query: 60  QGDVSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAV 119
            G++S F AL T+L+AT+GTGNI GVATAI LGGPGALFWMW  AL GMATKY E +LAV
Sbjct: 61  TGEISPFQALMTSLAATVGTGNIAGVATAIFLGGPGALFWMWCTALVGMATKYCEVVLAV 120

Query: 120 KYRQIDDKGQMVGGPMYYLRDGVSSKT--LAVLFAVFAVGVACFGIGTFPQVNAILDATQ 177
            YR+ DD+G+ VGGPMY +++G+  K   L   FA+F  G+A FGIG   QVN++  A +
Sbjct: 121 HYREKDDRGEHVGGPMYAIKNGLGKKWIWLGTAFAIFG-GLAGFGIGNMVQVNSMAHALE 179

Query: 178 ISFGVPREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLA 237
            +F VP  A+ +V  V+V +V +GGI+ I  VA  +VP M L Y+IA   V+V N   + 
Sbjct: 180 TTFAVPLWATGLVTMVIVGLVILGGIRRIGVVAASLVPFMCLAYLIAAAVVLVVNVSAIP 239

Query: 238 DAVELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCV 297
            A +L+   AFT  AATGGF GA++M AI+ G+ARG+FSNE+GLG+A +A AA  T S V
Sbjct: 240 AAFDLIFTHAFTPIAATGGFAGAAVMAAIRFGVARGIFSNEAGLGTAGIAQAAGTTTSSV 299

Query: 298 EQGLISMTGTFFDTIIICTMTGLALILTGAWQSDLSGAAMTTYAFATGLNAQTIGPMLVS 357
             G+I M GTF DTII+C+MTGLA+I TG W S  SGAA++  AF + +    IG ++++
Sbjct: 300 RSGMIGMLGTFIDTIIVCSMTGLAIICTGVWTSGESGAALSAAAFESAMPG--IGGIILT 357

Query: 358 IGLMFFAFTTILGWNYYGERCMVFLFGTKAVLPYKIVFIGLIASGAFLHLDLIWIIADIV 417
           I L+ FAFTTILGW+Y+GE+C  FL GT+A+ P++++++  +  GA   LD  W++AD +
Sbjct: 358 IALVVFAFTTILGWSYFGEKCWEFLVGTRAIWPFRVIWVLAVPFGAIAQLDFAWLLADTL 417

Query: 418 NGLMAIPNLIGLVALRHVVVEETKQYFA 445
           NGLMAIPNLI L+ L  VVV+ TK+YFA
Sbjct: 418 NGLMAIPNLISLLLLSPVVVKLTKEYFA 445