Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., amino acid carrier transmembrane protein from Sinorhizobium meliloti 1021

 Score =  275 bits (702), Expect = 3e-78
 Identities = 168/454 (37%), Positives = 254/454 (55%), Gaps = 17/454 (3%)

Query: 1   MNNLQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQ 60
           M+ +  FL T+    WG  L+  L+  G+YFT RLG  Q     + +  V  R  S D  
Sbjct: 1   MDTIIGFLNTI---FWGYVLIYGLLAVGLYFTVRLGFPQIVHF-SEMFRVLSRGGSKDAA 56

Query: 61  GDVSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVK 120
           G +S F AL  +L++ +GTGN+ GVA A+ LGGPGA FWMW+ A  GMAT YAE  LA  
Sbjct: 57  G-ISPFQALMVSLASRVGTGNLAGVAVALYLGGPGATFWMWIVAFVGMATAYAESALAQL 115

Query: 121 YRQIDDKGQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFG-IGTFPQVNAILDATQIS 179
           Y+  ++ GQ  GGP +Y+  G+++   A +F+  A  +  FG +    Q N+I DA Q +
Sbjct: 116 YKIRNEDGQYRGGPAFYIARGLNAPWAATIFS--ACLILSFGLVFNAVQANSIADAVQGA 173

Query: 180 FGVPREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADA 239
           FGVP+ A  V + +L  +V  GGI+ IA+VA  VVP MA  Y++  + V++ NA  +   
Sbjct: 174 FGVPKLAVGVAVALLSGVVIFGGIRQIARVAEIVVPFMAAAYLLTAVYVLIANASAVPGV 233

Query: 240 VELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAK--TDSCV 297
           +  ++ SAF    A GG  G  I  A+ +G+ RG+FSNE+G+GSAP  AA A        
Sbjct: 234 LWTIISSAFGFQEAAGGITG-GIAAAMLNGVKRGLFSNEAGMGSAPNIAAVATPVPHHPS 292

Query: 298 EQGLISMTGTFFDTIIICTMTGLALILTGAWQ--SDLSGAAMTTYAFATGLNAQTIGPML 355
            QG +   G F DTI+ICT T + ++L+G  +  S ++G  +T  A +T +   + G   
Sbjct: 293 SQGFVQSLGVFIDTILICTATSVMILLSGTLEPGSGVTGTQLTQAAMSTHIG--SAGTYF 350

Query: 356 VSIGLMFFAFTTILGWNYYGERCMVFLFGTK--AVLPYKIVFIGLIASGAFLHLDLIWII 413
           ++I + FFAFT+I+G   Y E  + +L G     ++  +   + ++  GA+  +  ++  
Sbjct: 351 IAIAIFFFAFTSIIGNYSYAENALTYLGGGNRLGLMIMRCATLAMVVWGAYESITTVFDA 410

Query: 414 ADIVNGLMAIPNLIGLVALRHVVVEETKQYFAAR 447
           AD   GLMA  NL+ ++ L   + + TK YF  R
Sbjct: 411 ADASMGLMATINLVAILLLSGTIAKLTKDYFEQR 444