Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., amino acid carrier protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  453 bits (1166), Expect = e-132
 Identities = 231/463 (49%), Positives = 330/463 (71%), Gaps = 9/463 (1%)

Query: 1   MNNLQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVF-GREKSSDK 59
           M  +   +++++SLVWG P+L++++G G+Y +  L LL   +L     +++ GR     K
Sbjct: 1   MEAVTELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGK 60

Query: 60  Q--GDVSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLL 117
           +  GDVS F AL T+LSATIGTGNI GVATAI +GGPGALFWMW  AL GMATKY+E +L
Sbjct: 61  EVKGDVSPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVL 120

Query: 118 AVKYRQIDDKGQMVGGPMYYLRDGVSSKT--LAVLFAVFAVGVACFGIGTFPQVNAILDA 175
           AV+YR++D+KG  +GGPMYY+++G+ SK   L   FA+F    A FGIG   Q N++  A
Sbjct: 121 AVRYREVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFG-SFAGFGIGNTVQANSVASA 179

Query: 176 TQISFGVPREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADK 235
              +FGVP   S VV+ VLV +V +GGI+ IA VAGK+VP M +FYI A ++V+V  A +
Sbjct: 180 LTSNFGVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASE 239

Query: 236 LADAVELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDS 295
           +  A+ L++ SAF+  AA GGF GA++M+AIQ G+ARGVFSNE+GLGSAP+A AAA+T S
Sbjct: 240 IPAALSLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKS 299

Query: 296 CVEQGLISMTGTFFDTIIICTMTGLALILTGAWQSDLSGAAMTTYAFATGLNAQTIGPML 355
            V QGL+ M GTF DTII+C++TGLA++++GAW S  +GAA+T+YAF+   +A  IG  +
Sbjct: 300 PVTQGLVGMLGTFIDTIIVCSITGLAIVVSGAWTSGENGAALTSYAFS---HALPIGDYI 356

Query: 356 VSIGLMFFAFTTILGWNYYGERCMVFLFGTKAVLPYKIVFIGLIASGAFLHLDLIWIIAD 415
           V++ L  FAFTTILGW+ Y E+C+ +L G KAV+P+++++  ++  GA   LD +W++AD
Sbjct: 357 VAVALAIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVVPLGAMGSLDFVWLLAD 416

Query: 416 IVNGLMAIPNLIGLVALRHVVVEETKQYFAARYQYSEAEAQVQ 458
            +N +MAIPNLI L  L  VV + T+++F++R + S    + +
Sbjct: 417 TLNAMMAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEAE 459