Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., sodium/alanine symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  273 bits (698), Expect = 9e-78
 Identities = 166/453 (36%), Positives = 246/453 (54%), Gaps = 34/453 (7%)

Query: 13  SLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQGDVSSFAALCTA 72
           +  WGP +L+LLVG G++F    GL  FR L  A+ +V G+   +D  G++S   AL +A
Sbjct: 18  AFAWGPHMLVLLVGGGLFFLIYSGLAPFRYLKHAIDIVRGKYPEADAAGNISHAGALSSA 77

Query: 73  LSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYRQIDDKGQMVG 132
           ++ T+G GNI GVA AI  GGPGA+FWMW++AL GMATK+  C LA+ YR  D+ G++ G
Sbjct: 78  MAGTVGMGNIGGVALAIVAGGPGAIFWMWVSALVGMATKFFTCSLAIMYRGTDETGRVRG 137

Query: 133 GPMYYLRDGVSS--KTLAVLFAVFAVGVACFGIGTFPQVNA---ILDATQISFGVPREAS 187
           GPMY +  G+    K LAV F +  +      +G FP  N    +    +  F  P +  
Sbjct: 138 GPMYIITHGLGQKWKPLAVFFCLVGL------VGNFPLFNTNQLVQILKEYLFLSPGDTG 191

Query: 188 AVV---------------LTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTN 232
             V               +  LVA+V +GGI+ IA VA +VVP M L Y+   L VI+++
Sbjct: 192 VAVGSGEHFALELGLGLAIMSLVALVILGGIKRIAAVAIRVVPTMILLYVGCALYVILSH 251

Query: 233 ADKLADAVELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAK 292
              +   +  ++  AF+  +  GG LG  +     +G+ R  FSNE+G+G+  M    AK
Sbjct: 252 LGDVPMHLWRIVEDAFSVQSVAGGILGTML-----TGVKRAAFSNEAGIGTEVMVHGNAK 306

Query: 293 TDSCVEQGLISMTGTFFDTIIICTMTGLALILTGAW-QSDLSGAAMTTYAFATGLNAQTI 351
           T   V++GL++M G   DT+++CT T L ++++G W Q   +G ++++ AFA  +    I
Sbjct: 307 TSEPVKEGLVAMLGPAIDTLLVCTATALIILISGVWEQGGANGISLSSAAFAATMPG--I 364

Query: 352 GPMLVSIGLMFFAFTTILGWNYYGERCMVFLFGTKAVLPYKIVFIGLIASGAFLHLDLIW 411
           GP L+ + + FFA TTI    +YG +C  FLFG +    Y  +++  I   A   L  I 
Sbjct: 365 GPYLLLVCVSFFAITTIFTQAFYGSQCFAFLFGARRERWYLYLYLLAILFAATNSLTDIV 424

Query: 412 IIADIVNGLMAIPNLIGLVALRHVVVEETKQYF 444
            I D   GLMAIP +   + L   V    K YF
Sbjct: 425 NIIDGAYGLMAIPTMTAALLLAPRVRAAAKDYF 457