Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

 Score =  551 bits (1421), Expect = e-161
 Identities = 282/449 (62%), Positives = 351/449 (78%), Gaps = 8/449 (1%)

Query: 3   NLQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQGD 62
           N  + L  ++++VWGP  L LLVGTG+Y T RL L+Q  +LP AL ++F   K +  QGD
Sbjct: 2   NFHALLSEINAIVWGPITLCLLVGTGLYLTLRLRLIQVFKLPLALRLLF---KPASGQGD 58

Query: 63  VSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYR 122
           +SSFAALCTALSATIGTGNIVGVATAIK+GGPGALFWMWLAA FGMATKY EC+LA+KYR
Sbjct: 59  LSSFAALCTALSATIGTGNIVGVATAIKVGGPGALFWMWLAAFFGMATKYGECMLALKYR 118

Query: 123 QIDDKGQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFGIGTFPQVNAILDATQISFGV 182
             D +G + GGPMYY+  G+    LA LFA+F VGVA FGIGTF QVNAI DA  I+F V
Sbjct: 119 TTDARGNIAGGPMYYIERGLGLGWLAKLFALFGVGVAFFGIGTFAQVNAISDAMTIAFHV 178

Query: 183 PREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADAVEL 242
           P   +A+VLT+LVA VT+GG++ IAKVA K+VP+MAL Y++ACL ++VT ++++  A++L
Sbjct: 179 PAWVTALVLTLLVAAVTLGGVKRIAKVAQKLVPSMALGYVLACLWILVTFSEQIIPALQL 238

Query: 243 VLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVEQGLI 302
           V+ SAF+  +A GGFLGA++  AIQ GIARGVFSNESGLGSAP+AAAAAKT   VEQGL+
Sbjct: 239 VIHSAFSPISAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLV 298

Query: 303 SMTGTFFDTIIICTMTGLALILTGAWQSDLSGAAMTTYAFATGLNAQTIGPMLVSIGLMF 362
           SMTGTFFDT++ICT+TGL LI+TG W  D +GAAMT+ AFATG +A  IG  LV+I L+ 
Sbjct: 299 SMTGTFFDTLLICTITGLVLIITGVWSGDAAGAAMTSAAFATGGSA-VIGQYLVTIALVC 357

Query: 363 FAFTTILGWNYYGERCMVFL----FGTKAVLPYKIVFIGLIASGAFLHLDLIWIIADIVN 418
           FAFTTILGW+YYGERC  +L     G + +  Y+ +F+ LIA GAF+ LDLIW++AD VN
Sbjct: 358 FAFTTILGWHYYGERCWYYLTGHKLGERGIKIYQFIFLSLIAVGAFIQLDLIWLLADTVN 417

Query: 419 GLMAIPNLIGLVALRHVVVEETKQYFAAR 447
           GLMAIPNLI L+ LR V++ +T  YFAAR
Sbjct: 418 GLMAIPNLIALIGLRKVIIADTLSYFAAR 446