Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  275 bits (703), Expect = 2e-78
 Identities = 159/445 (35%), Positives = 246/445 (55%), Gaps = 11/445 (2%)

Query: 4   LQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTAL-AMVFGREKSSDKQGD 62
           L++ +  +++L+WG  L+  LVG G+YFT RL  +Q      +L  M   R+     +  
Sbjct: 2   LETIVNFLNALLWGKLLVYGLVGAGLYFTLRLVFIQLTHFKHSLKVMTMSRQGC---ESG 58

Query: 63  VSSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYR 122
           +SSF   CT+++A +G GN+ GVA AI   GPGA+FWMWL A+ GMAT   E  LA  Y+
Sbjct: 59  LSSFQVFCTSMAARVGAGNMAGVAVAIGAAGPGAVFWMWLIAMLGMATAMVESTLAQVYK 118

Query: 123 QIDDKGQMVGGPMYYLRDGVSSKTLAVLFAVFAVGVACFGIGTFPQVNAILDATQISFGV 182
             D  GQ  GGP YY+  G+  + + VLFA F + +A   +    Q N I  A +  FG 
Sbjct: 119 VRDTNGQFRGGPSYYMEKGLGQRWMGVLFAFFLI-IAFGLVFNAVQANTITGAMERVFGF 177

Query: 183 PREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADAVEL 242
                 + L +    V +GG++ +A+V+  +VP MAL YI+    +++ N D+L   + L
Sbjct: 178 NPTYVGIGLVLASGFVIVGGLRKVARVSEFIVPIMALAYILIAFIIVLFNLDQLPAIISL 237

Query: 243 VLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAA--KTDSCVEQG 300
           ++ SAF    A  G +  ++  A+Q+GIARG+FSNE+G+GSA   AA+A    +    QG
Sbjct: 238 IVKSAFGWQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQG 297

Query: 301 LISMTGTFFDTIIICTMTGLALILTGAWQSDLSGAAMTTYAFATGLNAQTIGPMLVSIGL 360
            + M G F DTI+ICT T   ++L+G   S   G  +T  A +   +    G   ++I +
Sbjct: 298 FVQMMGVFVDTIVICTATAAIILLSGDIGSSEDGIRLTINAMSN--HVGDWGGAFIAIAI 355

Query: 361 MFFAFTTILGWNYYGERCMVFLFG--TKAVLPYKIVFIGLIASGAFLHLDLIWIIADIVN 418
             F FT+I+    Y E  ++FL G  TKA+  +++  +G++  GA   + L+W +AD+  
Sbjct: 356 FLFCFTSIIANYSYAETNVMFLTGNSTKALPLFRLCVLGMVMFGAVAKISLVWNLADVSM 415

Query: 419 GLMAIPNLIGLVALRHVVVEETKQY 443
           GLMA  N+I L+ L  + +     Y
Sbjct: 416 GLMATVNIIALLLLSGLAIRVINDY 440