Pairwise Alignments

Query, 458 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  266 bits (681), Expect = 9e-76
 Identities = 164/466 (35%), Positives = 247/466 (53%), Gaps = 33/466 (7%)

Query: 4   LQSFLQTVDSLVWGPPLLILLVGTGVYFTFRLGLLQFRRLPTALAMVFGREKSSDKQGDV 63
           +   +  V+++VW P L+ L +G G++F+ R   LQ R LP  + ++F   KS+D    V
Sbjct: 1   MNEIVNAVNNIVWSPALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMFDG-KSTD--AGV 57

Query: 64  SSFAALCTALSATIGTGNIVGVATAIKLGGPGALFWMWLAALFGMATKYAECLLAVKYRQ 123
           SSF AL   L+  +GTGNI GVATAI  GGPGALFWMW+ A  G ++ + E  L   Y++
Sbjct: 58  SSFQALAMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYKE 117

Query: 124 IDDKGQMVGGPMYYLRDGVSSKTLAVLFA---VFAVGVACFGIGTFPQVNAILDATQISF 180
               G+  GGP +Y+  G+  K  A  FA   +FA G+   G+    Q N+I  + + +F
Sbjct: 118 -KINGEYRGGPAFYIEKGLGMKWYAWTFAIATIFACGILLPGV----QANSIGSSLKTAF 172

Query: 181 GVPREASAVVLTVLVAIVTIGGIQSIAKVAGKVVPAMALFYIIACLSVIVTNADKLADAV 240
            +    +A +L +L+  +  GG++ IA  A  VVP MAL YII    +I  N  +L D +
Sbjct: 173 DIDPNVTAAILAMLLGFIIFGGVKRIAHFASTVVPFMALGYIIVACVIIALNIGQLPDII 232

Query: 241 ELVLVSAFTSTAATGGFLGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVEQG 300
            L+L SAF   A  G  LG    LAI  G+ RG++SNE+G G+ P A++AA      +QG
Sbjct: 233 MLILKSAFGLDAGFGAILG----LAIMWGVKRGIYSNEAGQGTGPHASSAAAVSHPAKQG 288

Query: 301 LISMTGTFFDTIIICTMTGLALILTG----------AWQSDLSGAAMTTYAFATGLNAQT 350
           L+     + DT+ +C+ TG  L++TG          A  + ++G A       T + +  
Sbjct: 289 LVQAFSVYVDTLFVCSATGFMLLITGLYNVQGPDGAALYTGIAGVAAGPGYVQTAMESMM 348

Query: 351 --IGPMLVSIGLMFFAFTTILGWNYYGERCMVFLFGTKAVLPY-----KIVFIGLIASGA 403
              G M V++ L FFAFTTI+ + Y  E  + ++   KA  P+     K+V +     G 
Sbjct: 349 PGFGNMFVAVALFFFAFTTIVAYYYIAETNIAYI-NRKANRPWLTVVLKVVLMASTVYGT 407

Query: 404 FLHLDLIWIIADIVNGLMAIPNLIGLVALRHVVVEETKQYFAARYQ 449
               DL W + DI  GLMA  N+I ++ L+ +     K Y + + Q
Sbjct: 408 VKTADLAWGMGDIGVGLMAWLNIIAIILLQRIAFTCLKDYESQQKQ 453