Pairwise Alignments

Query, 212 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Homoserine/homoserine lactone efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (256), Expect = 3e-27
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 4/210 (1%)

Query: 1   MVIQNFEAFFIAITILTLTPGLDTALVIRNTSRAGFADGCTTSLGICFGLFVHATFSAIG 60
           MV++ + AFF A  +++L+PG      + +  R GF  G   +LG+  GL +     A G
Sbjct: 1   MVLETWLAFFAACWVISLSPGAGAIASMSSGLRYGFWRGYWNALGLQLGLALQIVIVAAG 60

Query: 61  ISAILAQSAELFQIVKMVGAAYLIWLGISSLRSLMKTGQGIEVASLAHAQFRLTRSLREG 120
           + AIL  SA  F  +K  G AYL++LGI   R++      I   S+          +  G
Sbjct: 61  VGAILTASATAFYAIKWFGVAYLVYLGIKQWRAI---PGDISDDSVVRPIGNPLALVFRG 117

Query: 121 FLSNVLNPKTAVFYLAFLPQFINPDYSPLAQSLLMALIHFAIAMVWQCGLAGALSSAKNL 180
           FL N+ NPK  VF LA LPQFINP    + Q L++ +    + ++   G  G  S    L
Sbjct: 118 FLVNISNPKALVFMLAVLPQFINPHAPLIQQYLILGVTMVVVDLIVMAGYTGLASKVLRL 177

Query: 181 LKNASFMRWMEGT-TGVVLVALGIKLLLEK 209
           L+     R M  T  G+ + A G+   + K
Sbjct: 178 LRTPKQQRRMNRTFAGLFIGAAGLLATIRK 207