Pairwise Alignments

Query, 212 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., threonine efflux protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 24/215 (11%)

Query: 15  ILTLTPGLDTALVIRNTSRAGFADGCTTSLGICFGLFVHATFSAIGISAILAQSAELFQI 74
           +  ++PG D A++++  +         T++G+   +  H   S  G+S ++  S  L+ +
Sbjct: 15  VALVSPGPDFAIMVKIATSQPRNTAIATAVGVSVAILAHTILSLTGVSLVIKSSHTLYLL 74

Query: 75  VKMVGAAYLIWLGISSLRSL---------MKTGQGIE--VASLAHA------QFRLTRSL 117
           V+++GA+YL W+G  +L++          +  G+  E  VA+ A A      Q +  +SL
Sbjct: 75  VQLLGASYLAWMGFGALKATIAFFRKPKRLLKGEEAESSVATEAQANTGDNSQTKAEKSL 134

Query: 118 --REGFL----SNVLNPKTAVFYLAFLPQFINPDYSPLAQSLLMALIHFAIAMVWQCGLA 171
             R+GF+    +N+LNPK  VF+L      I P  +P A  +  AL+ F ++++W   LA
Sbjct: 135 SPRQGFMTGLYTNLLNPKALVFFLTLFSALITPSVTP-ATKVAAALVLFVLSLIWFGFLA 193

Query: 172 GALSSAKNLLKNASFMRWMEGTTGVVLVALGIKLL 206
             LS AK   K       ++   GV+ +++ + ++
Sbjct: 194 LMLSKAKVQQKMQRITPIIDAVIGVIFMSVALAIV 228