Pairwise Alignments

Query, 212 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., efflux protein, LysE family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (354), Expect = 2e-38
 Identities = 87/233 (37%), Positives = 117/233 (50%), Gaps = 38/233 (16%)

Query: 15  ILTLTPGLDTALVIRNTSRAGFADGCTTSLGICFGLFVHATFSAIGISAILAQSAELFQI 74
           +LT+TPG DT LV+RN  R G   G +T+LG   GL VH + SA+G+SA+L  SAE F  
Sbjct: 14  LLTVTPGPDTMLVLRNVLRGGTRGGVSTALGSAAGLLVHLSASALGVSAVLLHSAEAFAT 73

Query: 75  VKMVGAAYLIWLGISSLRSLMKTGQGIEVASLAHA------------------------- 109
           V++ GA YL+WLG  SL + +K     + A  AHA                         
Sbjct: 74  VRLAGACYLLWLGARSLYAALKGPSTPDAAREAHAGGEGLPCCADRGSASGNGEAPSDAL 133

Query: 110 -------QFRLTRSLREGFLSNVLNPKTAVFYLAFLPQF------INPDYSPLAQSLLMA 156
                     L ++ REGFL+NVLNPK AVFYLA LPQ            + L +SLL  
Sbjct: 134 SGEYGTGTAPLVQAWREGFLTNVLNPKVAVFYLAVLPQVAVSAGATVDTTTALGRSLLFG 193

Query: 157 LIHFAIAMVWQCGLAGALSSAKNLLKNASFMRWMEGTTGVVLVALGIKLLLEK 209
           L H  I + W   L+ +L   +  L      RW++G  G ++V  G++L  EK
Sbjct: 194 LFHIIIGVCWFSFLSCSLQRVRTTLLRPMVRRWLDGGVGALMVFFGVRLATEK 246