Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., VgrG protein from Pseudomonas fluorescens FW300-N2E2

 Score =  331 bits (848), Expect = 1e-94
 Identities = 206/648 (31%), Positives = 326/648 (50%), Gaps = 29/648 (4%)

Query: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRN 72
           L  E L+++   G E L            F YE+QL S  + +   Q++ K   + L  +
Sbjct: 16  LGPEVLLLKDMGGGEELGRL---------FNYELQLHSLDNAIDLNQLLGKPMCVSLQLD 66

Query: 73  SQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQ 132
               +  HGIV   SQ         YQ TL P L  L+   + RIFQ  T+P+I+  + +
Sbjct: 67  GGGERYFHGIVARCSQNVDQGQFASYQATLRPWLWLLTRTSDCRIFQNLTIPQIIKQVFR 126

Query: 133 EMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDAS 192
           ++G +D+  AL +   + E+CVQYRE+  DF+ RL  +EG+ Y F HE G+H L  +DA 
Sbjct: 127 DLGFSDFEDALSQTYREWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQGRHVLVLADAY 186

Query: 193 DSLSKLPE--PIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250
            + +K P    +PY        +  +IH      + +   ++L DY F++P+ + +    
Sbjct: 187 GAHTKAPGYGSVPYYPKNEQQRERDHIHDWHLAQEVQPGSLELNDYDFQRPS-ARIDVRA 245

Query: 251 GTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFD 310
                +    Y  +D PG Y    +G  +++ R++ L+          N   L +G+ F 
Sbjct: 246 AMPRPHAAGDYPLYDYPGTYVQSQDGEHYARTRIEALQTQHEQVELSGNARGLGSGHLFS 305

Query: 311 LQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRAEP-QPK 369
           L        NR++++V   +   Q    +  GG+ +  + +  + I     +R  P   +
Sbjct: 306 LTGFSRQDQNREYLIVGARYYISQESG-ETGGGAPSAQFESSLTCIDAQQSYRPLPITHR 364

Query: 370 PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGF 429
           P V GP  A VVGP+GEEI+ D+ GRVK+HF WDR+   NE SSCW+RVSQ WAG  +G 
Sbjct: 365 PIVKGPQTALVVGPKGEEIWTDQFGRVKVHFYWDRHDQSNENSSCWIRVSQAWAGKNWGS 424

Query: 430 IAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG---EG 486
           + IPRIG EVIV FL GDPD+PI+TGR Y+A  T PY LP + T++  ++ + +G     
Sbjct: 425 VQIPRIGQEVIVSFLEGDPDRPIVTGRVYNAEQTVPYALPANATQSGTKSRSSKGGTPAN 484

Query: 487 FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVE 546
           FNE+  ED+ G EQ+Y+HA+++ D ++E D +  + HD +          I HN+ + + 
Sbjct: 485 FNEIRMEDKKGAEQLYIHAERNQDIVVEVDESHSVGHDRN--------KSIGHNETVRIG 536

Query: 547 WESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVV-IEAGSEITVKAGGSF 605
            +   AV     L + G+        ++ EAG++I +  G+ V+   A  EI +      
Sbjct: 537 QDRLRAVQRNDALLVGGAKSDSISTQYLVEAGSQIRLVCGKSVLEFNASGEINISGTAFN 596

Query: 606 VKVDPAGVHLSGALVNLNSGGSA---GSGSGFGGAMPALPGGLEPAVA 650
           +     G   +G  ++LNSGG++     G G  G + A      PA A
Sbjct: 597 IYASGNGNIDTGGRLDLNSGGASEVDAKGKGIKGVIDAAVKAFFPAKA 644