Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., VgrG protein from Pseudomonas fluorescens FW300-N2E2

 Score =  389 bits (999), Expect = e-112
 Identities = 239/685 (34%), Positives = 363/685 (52%), Gaps = 35/685 (5%)

Query: 6   YSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRA 65
           + + +  LE + L V  F G E++S           + +E++L S  S++  E +++++A
Sbjct: 10  FHLTIPDLEHD-LQVLAFEGCEAISTP---------YSFEIELISEQSDIDLECLLNQQA 59

Query: 66  ELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPE 125
            L   +       VHG++    QGD G   T Y++ LVP L  L  R N RIFQ  +VP+
Sbjct: 60  FLAFNKQGS---GVHGLIYRVVQGDTGKRLTHYKIRLVPRLAYLEHRTNQRIFQHVSVPQ 116

Query: 126 ILSILLQEMGI--NDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGK 183
           I++ +L+E GI  + + F L      R++CVQYRESD+ F+ RL  EEGL Y F H    
Sbjct: 117 IITSILKEHGILTDAHRFQLSASYSPRDYCVQYRESDLHFIERLCHEEGLHYHFQHSESG 176

Query: 184 HTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAY 243
           H L F D      +L     Y    G   D P IH    R +   S V  +DY FKK  +
Sbjct: 177 HHLVFGDDQTVFPRLEHRTVYKHGSGMVDDEPVIHRFGLRLETRTSRVTRRDYDFKKSTF 236

Query: 244 SFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLL 303
               + Q   ++  +   + +D PG +  +  G   S+  L+  R     A G+S++P L
Sbjct: 237 LLESSCQ-PGIEKIRPDLEAYDYPGDFTQEKRGRLLSRRALERHRIDYRQAEGKSDQPAL 295

Query: 304 RAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQE--DGGSGATT------YSNQFSL 355
             G+   L  H     N  W++  ++H+G+QPQ L+E     +G T       Y N F  
Sbjct: 296 TTGHFLTLSGHPRQEWNDLWLLTEVHHEGKQPQVLEEIPPSDTGRTADHFNQGYRNHFVA 355

Query: 356 IPGHLHWRAEP-QPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSC 414
            P    +R++    KP+V G   A V GP+GEEI CD +GRVK+ F WDR  + ++ SSC
Sbjct: 356 TPWDATFRSQRVYQKPRVWGSQTAIVTGPKGEEIHCDLYGRVKVRFFWDRTGDFDDGSSC 415

Query: 415 WVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTK 474
           W+RV+  WAG++YG + IPR+G EV+V F+ GDPD+P+I+G   ++ N  PY LP HKT+
Sbjct: 416 WLRVASNWAGNRYGGVTIPRVGMEVLVTFIEGDPDKPLISGCLTNSANATPYPLPAHKTR 475

Query: 475 TVLRTETHQG-EGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQ 533
           TV R+ +  G +GFNEL  ED+AG+E IYL AQ+D +  IEND    I ++   TV  + 
Sbjct: 476 TVFRSCSSPGNKGFNELHLEDRAGQELIYLRAQRDMEQKIENDSRLEIGNERRETVRGNS 535

Query: 534 FTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEA 593
            T +   +H T   +    V G   L +  + H    +    EAG +IH+KAG  VV+EA
Sbjct: 536 ITALHAEEHRTTAADRTVQVEGNDYLRV-ANRHTCVDQTLAVEAGQQIHIKAGAHVVLEA 594

Query: 594 GSEITVKAGGSFVKVDPAGVHLSGALVNLNSGGSAGSGSGFGGAMPALPGGLEPAVALAP 653
           G+ +++KAGG  + ++ +G++ S     +  GG+  +G+    A    PG  +P  A AP
Sbjct: 595 GASLSLKAGGQHILINHSGIYSSS---EIQLGGAPMAGA---TASSFTPGLTDPLAAPAP 648

Query: 654 PQTISYQALLQAEQANVPAVKVCPL 678
               + +AL+ A +A    +  CP+
Sbjct: 649 ILAPTQRALITASKA--AGLDFCPI 671