Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., VgrG protein from Pseudomonas fluorescens FW300-N2E2

 Score =  352 bits (904), Expect = e-101
 Identities = 234/672 (34%), Positives = 345/672 (51%), Gaps = 45/672 (6%)

Query: 18  LVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQ 77
           L V  F GQE++S           +R++++L S  S+L  E+++ ++A L          
Sbjct: 21  LKVLEFKGQEAISQP---------YRFDLELVSERSDLALEELLHRQAFLGFDDRDS--- 68

Query: 78  RVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGIN 137
            VHG V + +QGD G   T YQ++LVP L  L  R N RIFQ+  VP+I++ +L+E GI 
Sbjct: 69  GVHGQVYSVAQGDSGKRLTRYQISLVPRLAYLRHRINQRIFQRLNVPDIVARVLKEHGIL 128

Query: 138 DYA--FALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSL 195
             A  F L     +RE+CVQY ESD+ F+ R+ AE G+ Y F H    H L F D     
Sbjct: 129 ADACQFTLGGQYPEREYCVQYGESDLAFIERICAEVGIHYHFRHRPCGHLLVFGDDQTVF 188

Query: 196 SKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELD 255
            +LPE   Y    G A D P I  L  R Q   + V L+DY F++P  S LQT    +LD
Sbjct: 189 PRLPESTLYLPDSGMATDEPAIKRLAVRLQTRTTAVTLRDYDFRRPG-SLLQT----QLD 243

Query: 256 YQQTRY-QHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEH 314
            +Q    + +  PG +    +G   ++  L+        A G SNE  L +G+   ++EH
Sbjct: 244 NRQRPVLEDYHYPGGFCARDDGKHLTRRALERHGADHCVAEGGSNENALVSGHFMRIKEH 303

Query: 315 LDPAMNRDWVVVSINHQGEQPQALQED--GGSGATTYSNQFSLIPGHLHWRAE-PQPKPQ 371
                N  W++  I+H G QPQ L+E   G      Y N F   P  + +R      KP+
Sbjct: 304 PREPWNDLWLLTQIDHHGRQPQVLEETAAGPDEFQGYKNTFLATPWDVFFRPPLHHEKPR 363

Query: 372 VDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIA 431
             G  +A V GP   EI CDE GRVK+   WDR    +E SSCW+RV+ GWA  +YG + 
Sbjct: 364 AQGYQLAVVTGPVDSEIHCDEFGRVKVQLVWDRDGQRDEHSSCWLRVASGWAHDRYGAVM 423

Query: 432 IPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ-GEGFNEL 490
           IPR+G EV+V F++GD D+P++ G   +  N  P  LP  KT++VLR+++   G G+NEL
Sbjct: 424 IPRVGMEVLVGFIDGDVDKPLVVGCLPNGANPVPLDLPADKTRSVLRSQSSPGGGGYNEL 483

Query: 491 SFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESR 550
             ED+ G E+IYL AQ+++   + +D    + H+  + V      ++K ++      + R
Sbjct: 484 RIEDRKGAEEIYLRAQRNWTQHVLHDQRVQVDHERSIVVAGTARHELKADEQRLTHGQRR 543

Query: 551 EAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVKAGGSFVKVDP 610
             V  +  L + G  H++     +N A  + HV AGQ+VV++ G+ +T++AGG ++ +  
Sbjct: 544 AEVRHDDHLLVSGERHIRVTSQVLN-ASQQFHVSAGQQVVLDGGASVTLQAGGHWINIGA 602

Query: 611 AGVHLSGALVNLNSGG------SAGSGSGFGGAMPALPGGLEPAVALAPPQTISYQALLQ 664
            G+  S   V +  GG      SA SGS         PG  E  VA A P     Q L  
Sbjct: 603 GGISSS---VPIEVGGAPMAVMSAASGS---------PGSAEKRVAAAAPALSLAQIL-- 648

Query: 665 AEQANVPAVKVC 676
           + Q + P  + C
Sbjct: 649 SFQGSAPFCEEC 660