Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 853 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a

 Score =  230 bits (587), Expect = 3e-64
 Identities = 159/500 (31%), Positives = 248/500 (49%), Gaps = 33/500 (6%)

Query: 14  EDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRNS 73
           +++ L++  F G ESLS           F +E+ + SR + L  +  + + A+L +   +
Sbjct: 25  DEQELLLESFSGTESLSEL---------FSFELSMISRDAGLELKSQIGQPAQLAIELAT 75

Query: 74  QLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQE 133
              + ++G + AFS          Y  TL P L  LS R +SRIFQ+QT+  ++  +   
Sbjct: 76  GESRYINGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIFQEQTIEAVIRTVFAA 135

Query: 134 MG-INDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDAS 192
            G + D+ F L +      +  QYRESD+ F+ RL   EGL + F H   KHTL   D S
Sbjct: 136 YGALPDFEFQLSQPLKTHSYITQYRESDLTFVLRLLEHEGLFFYFDHNQEKHTLIILDHS 195

Query: 193 DSLSKLPEPIP---YNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTV 249
             LS LP+      ++A V    D+        R Q+    +Q  DY  K+P  S    +
Sbjct: 196 RDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTFDY--KQPRNSLPVGM 253

Query: 250 QGTELDYQQTRYQHFDAPGRYKDDV--NGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGY 307
                      Y+ +D    Y      +G    + RL+ +     T TG SN   +  G+
Sbjct: 254 PSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTFTGNSNCRAMYPGH 313

Query: 308 KFDLQEHLD----PAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR 363
            F+L +H D     A +R ++++++ H+G       E  G     Y+N+F  I   + +R
Sbjct: 314 TFELTQHFDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAG-----YTNEFVCIRHKIPYR 368

Query: 364 AE-PQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGW 422
                P+P ++GP+ A VVGP+GEE+F DE  R+++ F W R  +   Q + W+RV+   
Sbjct: 369 HPITVPRPSINGPLSAIVVGPDGEEVFTDELARIQVRFHWQR-GDSLPQGTTWLRVAMPS 427

Query: 423 AGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPP-----YTLPEHKTKTVL 477
           AGS +G   +PRIG EV+V FL GD D+P++T   Y+  N PP       LP ++T + +
Sbjct: 428 AGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPGNRTLSGI 487

Query: 478 RTETHQGEGFNELSFEDQAG 497
           RT+ H+G GFNEL F+D  G
Sbjct: 488 RTQEHKGSGFNELLFDDTPG 507